STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552255_01263Unannotated protein. (442 aa)    
Predicted Functional Partners:
GCA_001552255_01262
Unannotated protein.
 
  0.953
GCA_001552255_01261
Unannotated protein.
 
  0.941
GCA_001552255_01987
Unannotated protein.
  
 0.899
GCA_001552255_02641
Unannotated protein.
  
  0.866
GCA_001552255_01326
Unannotated protein.
  
 
 0.832
GCA_001552255_02498
Unannotated protein.
  
  0.821
GCA_001552255_01328
Unannotated protein.
 
 
 0.806
GCA_001552255_02101
Unannotated protein.
  
  
0.789
GCA_001552255_01327
Unannotated protein.
  
  0.776
GCA_001552255_02595
Unannotated protein.
  
  
  0.766
Your Current Organism:
Alicyclobacillus shizuokensis
NCBI taxonomy Id: 1220573
Other names: A. shizuokensis NBRC 103103, Alicyclobacillus shizuokensis NBRC 103103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.