STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAO42461.1Putative TonB-dependent receptor. (1046 aa)    
Predicted Functional Partners:
GAO42462.1
Hypothetical protein.
 
 
   0.962
GAO42900.1
Hypothetical protein.
  
   0.944
GAO44623.1
Hypothetical protein.
 
 
   0.873
GAO42463.1
Hypothetical protein.
 
     0.852
GAO41352.1
Hypothetical protein.
 
 
   0.767
GAO43692.1
Hypothetical protein.
 
 
   0.764
GAO41841.1
Hypothetical protein.
  
 
   0.752
GAO42128.1
Hypothetical protein.
  
 
   0.722
GAO41915.1
Hypothetical protein.
  
 
   0.713
GAO45601.1
Hypothetical protein.
 
 
   0.706
Your Current Organism:
Flavihumibacter petaseus
NCBI taxonomy Id: 1220578
Other names: F. petaseus NBRC 106054, Flavihumibacter petaseus NBRC 106054, Flavihumibacter petaseus T41, Sphingobacteriales bacterium T41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.