STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAC47352.1Putative cation efflux protein. (318 aa)    
Predicted Functional Partners:
GAC47353.1
Putative amino acid transporter.
       0.689
GAC47351.1
Hypothetical protein; Belongs to the WXG100 family.
       0.599
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
    0.514
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
    0.514
manA
Mannose-6-phosphate isomerase.
     0.498
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
  
    0.448
GAC47350.1
Hypothetical protein; Belongs to the WXG100 family.
       0.423
Your Current Organism:
Gordonia aichiensis
NCBI taxonomy Id: 1220583
Other names: G. aichiensis NBRC 108223, Gordonia aichiensis NBRC 108223
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.