STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571005_01618Unannotated protein. (233 aa)    
Predicted Functional Partners:
GCA_001571005_02360
Unannotated protein.
  
     0.586
GCA_001571005_01424
Unannotated protein.
  
     0.528
GCA_001571005_01616
Unannotated protein.
       0.517
GCA_001571005_01617
Unannotated protein.
       0.517
GCA_001571005_00392
Unannotated protein.
  
     0.487
GCA_001571005_01657
Unannotated protein.
  
     0.487
GCA_001571005_03570
Unannotated protein.
  
     0.484
GCA_001571005_03523
Unannotated protein.
  
     0.426
GCA_001571005_00956
Unannotated protein.
  
     0.413
GCA_001571005_01164
Unannotated protein.
  
 
   0.407
Your Current Organism:
Herbiconiux solani
NCBI taxonomy Id: 1220584
Other names: H. solani NBRC 106740, Herbiconiux solani DSM 19813, Herbiconiux solani K134/01, Herbiconiux solani NBRC 106740, Microbacteriaceae bacterium DSM 19813
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.