W2RQW0_9EURO protein (Cyphellophora europaea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W2RQW0_9EURO

GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family. (540 aa)

Predicted Functional Partners:

W2SDQ3_9EURO

0.776

W2S368_9EURO

0.753

W2S9Z1_9EURO

0.586

W2SB95_9EURO

0.578

W2SE23_9EURO

0.565

W2RVU0_9EURO

0.531

W2SG97_9EURO

0.525

W2SEA8_9EURO

0.506

W2RQI4_9EURO

0.491

W2RS84_9EURO

0.489

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W2RQI4_9EURO	W2RQW0_9EURO	W2RQI4	W2RQW0	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	0.491
W2RQI4_9EURO	W2RS84_9EURO	W2RQI4	W2RS84	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	Uncharacterized protein.	0.751
W2RQI4_9EURO	W2S9Z1_9EURO	W2RQI4	W2S9Z1	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	Uncharacterized protein.	0.805
W2RQI4_9EURO	W2SE23_9EURO	W2RQI4	W2SE23	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	Uncharacterized protein.	0.726
W2RQI4_9EURO	W2SEA8_9EURO	W2RQI4	W2SEA8	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family.	0.999
W2RQW0_9EURO	W2RQI4_9EURO	W2RQW0	W2RQI4	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.491
W2RQW0_9EURO	W2RS84_9EURO	W2RQW0	W2RS84	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	Uncharacterized protein.	0.489
W2RQW0_9EURO	W2RVU0_9EURO	W2RQW0	W2RVU0	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.531
W2RQW0_9EURO	W2S368_9EURO	W2RQW0	W2S368	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.753
W2RQW0_9EURO	W2S9Z1_9EURO	W2RQW0	W2S9Z1	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	Uncharacterized protein.	0.586
W2RQW0_9EURO	W2SB95_9EURO	W2RQW0	W2SB95	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	RING-type domain-containing protein.	0.578
W2RQW0_9EURO	W2SDQ3_9EURO	W2RQW0	W2SDQ3	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	GFO_IDH_MocA domain-containing protein.	0.776
W2RQW0_9EURO	W2SE23_9EURO	W2RQW0	W2SE23	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	Uncharacterized protein.	0.565
W2RQW0_9EURO	W2SEA8_9EURO	W2RQW0	W2SEA8	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family.	0.506
W2RQW0_9EURO	W2SG97_9EURO	W2RQW0	W2SG97	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	MAGE domain-containing protein.	0.525
W2RS84_9EURO	W2RQI4_9EURO	W2RS84	W2RQI4	Uncharacterized protein.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.751
W2RS84_9EURO	W2RQW0_9EURO	W2RS84	W2RQW0	Uncharacterized protein.	GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	0.489
W2RS84_9EURO	W2S9Z1_9EURO	W2RS84	W2S9Z1	Uncharacterized protein.	Uncharacterized protein.	0.911
W2RS84_9EURO	W2SE23_9EURO	W2RS84	W2SE23	Uncharacterized protein.	Uncharacterized protein.	0.909
W2RS84_9EURO	W2SEA8_9EURO	W2RS84	W2SEA8	Uncharacterized protein.	V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family.	0.736