W2RU77_9EURO protein (Cyphellophora europaea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W2RU77_9EURO

Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. (206 aa)

Predicted Functional Partners:

W2S2V8_9EURO

0.947

W2S9K6_9EURO

0.711

W2RUC9_9EURO

0.706

W2RTH5_9EURO

0.637

W2RJI2_9EURO

0.624

W2RKX3_9EURO

0.624

W2RPT3_9EURO

0.468

W2RV81_9EURO

0.468

W2S1I9_9EURO

0.468

W2SFB3_9EURO

0.468

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W2RJI2_9EURO	W2RPT3_9EURO	W2RJI2	W2RPT3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.779
W2RJI2_9EURO	W2RU77_9EURO	W2RJI2	W2RU77	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.	0.624
W2RJI2_9EURO	W2RV81_9EURO	W2RJI2	W2RV81	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Calmodulin; Belongs to the calmodulin family.	0.737
W2RJI2_9EURO	W2S1I9_9EURO	W2RJI2	W2S1I9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein; Belongs to the calmodulin family.	0.735
W2RJI2_9EURO	W2S9K6_9EURO	W2RJI2	W2S9K6	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.999
W2RJI2_9EURO	W2SFB3_9EURO	W2RJI2	W2SFB3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.737
W2RKX3_9EURO	W2RPT3_9EURO	W2RKX3	W2RPT3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.735
W2RKX3_9EURO	W2RU77_9EURO	W2RKX3	W2RU77	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.	0.624
W2RKX3_9EURO	W2RV81_9EURO	W2RKX3	W2RV81	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Calmodulin; Belongs to the calmodulin family.	0.735
W2RKX3_9EURO	W2S1I9_9EURO	W2RKX3	W2S1I9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein; Belongs to the calmodulin family.	0.735
W2RKX3_9EURO	W2S9K6_9EURO	W2RKX3	W2S9K6	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.997
W2RKX3_9EURO	W2SFB3_9EURO	W2RKX3	W2SFB3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.735
W2RPT3_9EURO	W2RJI2_9EURO	W2RPT3	W2RJI2	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.779
W2RPT3_9EURO	W2RKX3_9EURO	W2RPT3	W2RKX3	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.735
W2RPT3_9EURO	W2RU77_9EURO	W2RPT3	W2RU77	Uncharacterized protein.	Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.	0.468
W2RPT3_9EURO	W2S1I9_9EURO	W2RPT3	W2S1I9	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.818
W2RPT3_9EURO	W2S9K6_9EURO	W2RPT3	W2S9K6	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.892
W2RPT3_9EURO	W2SFB3_9EURO	W2RPT3	W2SFB3	Uncharacterized protein.	Uncharacterized protein.	0.943
W2RTH5_9EURO	W2RU77_9EURO	W2RTH5	W2RU77	WD_REPEATS_REGION domain-containing protein.	Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.	0.637
W2RU77_9EURO	W2RJI2_9EURO	W2RU77	W2RJI2	Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.624

page 1 of 3

Server load: low (24%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2024

Credits

Access

Info

About