W2S4I2_9EURO protein (Cyphellophora europaea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W2S4I2_9EURO

Uncharacterized protein. (986 aa)

Predicted Functional Partners:

W2RPE7_9EURO

0.943

W2S061_9EURO

0.912

W2S8T0_9EURO

0.909

W2RZN5_9EURO

0.908

W2RQC8_9EURO

0.907

W2S2E9_9EURO

0.903

W2SCJ7_9EURO

0.899

W2RKE7_9EURO

0.895

W2RPE0_9EURO

0.892

W2S3X4_9EURO

0.886

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W2RKE7_9EURO	W2RPE0_9EURO	W2RKE7	W2RPE0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.973
W2RKE7_9EURO	W2RPE7_9EURO	W2RKE7	W2RPE7	Protein kinase domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.934
W2RKE7_9EURO	W2RQC8_9EURO	W2RKE7	W2RQC8	Protein kinase domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.898
W2RKE7_9EURO	W2RZN5_9EURO	W2RKE7	W2RZN5	Protein kinase domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.762
W2RKE7_9EURO	W2S061_9EURO	W2RKE7	W2S061	Protein kinase domain-containing protein.	DHR10 domain-containing protein.	0.958
W2RKE7_9EURO	W2S2E9_9EURO	W2RKE7	W2S2E9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.876
W2RKE7_9EURO	W2S3X4_9EURO	W2RKE7	W2S3X4	Protein kinase domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.877
W2RKE7_9EURO	W2S4I2_9EURO	W2RKE7	W2S4I2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.895
W2RKE7_9EURO	W2S8T0_9EURO	W2RKE7	W2S8T0	Protein kinase domain-containing protein.	Cnd3 domain-containing protein.	0.905
W2RKE7_9EURO	W2SCJ7_9EURO	W2RKE7	W2SCJ7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.953
W2RPE0_9EURO	W2RKE7_9EURO	W2RPE0	W2RKE7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.973
W2RPE0_9EURO	W2RPE7_9EURO	W2RPE0	W2RPE7	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.921
W2RPE0_9EURO	W2RQC8_9EURO	W2RPE0	W2RQC8	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.938
W2RPE0_9EURO	W2RZN5_9EURO	W2RPE0	W2RZN5	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.809
W2RPE0_9EURO	W2S061_9EURO	W2RPE0	W2S061	Uncharacterized protein.	DHR10 domain-containing protein.	0.999
W2RPE0_9EURO	W2S2E9_9EURO	W2RPE0	W2S2E9	Uncharacterized protein.	Uncharacterized protein.	0.834
W2RPE0_9EURO	W2S3X4_9EURO	W2RPE0	W2S3X4	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.865
W2RPE0_9EURO	W2S4I2_9EURO	W2RPE0	W2S4I2	Uncharacterized protein.	Uncharacterized protein.	0.892
W2RPE0_9EURO	W2S8T0_9EURO	W2RPE0	W2S8T0	Uncharacterized protein.	Cnd3 domain-containing protein.	0.883
W2RPE0_9EURO	W2SCJ7_9EURO	W2RPE0	W2SCJ7	Uncharacterized protein.	Uncharacterized protein.	0.991