STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W2S724_9EURORibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (254 aa)    
Predicted Functional Partners:
W2RV11_9EURO
Centromere/microtubule-binding protein cbf5.
  
 0.999
W2RP56_9EURO
Uncharacterized protein.
   
   0.998
W2S9Q5_9EURO
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.998
W2S706_9EURO
H/ACA ribonucleoprotein complex subunit 3.
   
 0.996
W2RJM1_9EURO
Uncharacterized protein.
   
 0.995
W2SFP5_9EURO
rRNA 2'-O-methyltransferase fibrillarin.
   
 0.995
W2SEE7_9EURO
Nop domain-containing protein.
  
 0.994
W2RZQ1_9EURO
tRNA pseudouridine(55) synthase.
  
 0.993
W2SBL5_9EURO
Uncharacterized protein.
   
   0.993
W2SBD5_9EURO
Nop domain-containing protein.
   
 0.992
Your Current Organism:
Cyphellophora europaea
NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466
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