STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019595_00804Unannotated protein. (348 aa)    
Predicted Functional Partners:
GCA_002019595_01999
Unannotated protein.
 0.994
GCA_002019595_01064
Unannotated protein.
  
 0.930
GCA_002019595_01136
Unannotated protein.
  
 
 0.878
GCA_002019595_01763
Unannotated protein.
  
 
 0.878
GCA_002019595_03879
Unannotated protein.
  
 
 0.878
GCA_002019595_00803
Unannotated protein.
   
 0.858
GCA_002019595_03816
Unannotated protein.
 
 
 0.848
GCA_002019595_00802
Unannotated protein.
  
 
 0.824
GCA_002019595_01996
Unannotated protein.
 
 
  0.816
GCA_002019595_03160
Unannotated protein.
    
 0.790
Your Current Organism:
Bacillus abyssalis
NCBI taxonomy Id: 1221450
Other names: B. abyssalis, Bacillus abyssalis You et al. 2013, Bacillus sp. SCSIO 15042, CCTCC AB 2012074, DSM 25875, NBRC 109102, SCSIO 15042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.