STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selDSelenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. (349 aa)    
Predicted Functional Partners:
QY95_01725
Selenophosphate-dependent tRNA 2-selenouridine synthase.
   
 0.986
QY95_02129
Cysteine desulfurase.
   
 0.934
QY95_01517
Cysteine desulfurase.
   
 0.895
QY95_01666
Cysteine desulfurase.
   
 0.849
QY95_01723
Protein yraQ.
 
     0.781
QY95_00683
Siderophore biosynthesis L-2,4-diaminobutyrate decarboxylase.
     
 0.684
QY95_00342
Thioredoxin reductase.
     
 0.648
QY95_02724
Thioredoxin reductase.
     
 0.648
QY95_00498
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
 0.596
QY95_00413
Cysteine desulfurase, SufS subfamily.
    
 0.585
Your Current Organism:
Quasibacillus thermotolerans
NCBI taxonomy Id: 1221996
Other names: Bacillaceae bacterium 5.5LF48TDT, Bacillaceae bacterium MTCC 8252, Bacillus sp. SgZ-8, Bacillus thermotolerans, Bacillus thermotolerans Yang et al. 2013, CCTCC AB 2012108, KACC 16706, Q. thermotolerans, strain SgZ-8
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