STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
QY95_022154-oxalocrotonate decarboxylase. (263 aa)    
Predicted Functional Partners:
QY95_02217
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
  
 0.983
QY95_02216
4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
 
 
 0.976
QY95_02214
Tautomerase; Belongs to the 4-oxalocrotonate tautomerase family.
 
  
 0.931
QY95_02219
Catechol 2,3-dioxygenase.
   
 0.927
QY95_00526
5-carboxymethyl-2-hydroxymuconate delta-isomerase.
 
 
 0.881
QY95_02213
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase.
 
    0.784
QY95_00531
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
   
 0.782
QY95_02218
4-oxalocrotonate decarboxylase.
 
    
0.728
QY95_02223
4-hydroxyphenylacetate 3-monooxygenase.
 
   
 0.698
QY95_02220
Protein GlcG.
       0.642
Your Current Organism:
Quasibacillus thermotolerans
NCBI taxonomy Id: 1221996
Other names: Bacillaceae bacterium 5.5LF48TDT, Bacillaceae bacterium MTCC 8252, Bacillus sp. SgZ-8, Bacillus thermotolerans, Bacillus thermotolerans Yang et al. 2013, CCTCC AB 2012108, KACC 16706, Q. thermotolerans, strain SgZ-8
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