STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
QY95_02526Spore germination protein GerKA. (530 aa)    
Predicted Functional Partners:
QY95_02525
Spore germination protein GerKC.
  
 0.922
QY95_02523
Spore germination protein GerKB.
 
  
 0.918
QY95_03231
Stage V sporulation protein AD (SpoVAD).
  
  
 0.781
QY95_01328
Stage V sporulation protein AC (SpoVAC).
  
    0.777
gpr
Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.777
QY95_01327
Stage V sporulation protein AE (SpoVAE).
  
    0.774
QY95_02429
Stage V sporulation protein T, AbrB family transcriptional regulator (SpoVT).
  
     0.774
QY95_03076
Stage IV sporulation protein B.
  
     0.774
QY95_00128
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.773
QY95_01081
Stage II sporulation protein.
 
    0.773
Your Current Organism:
Quasibacillus thermotolerans
NCBI taxonomy Id: 1221996
Other names: Bacillaceae bacterium 5.5LF48TDT, Bacillaceae bacterium MTCC 8252, Bacillus sp. SgZ-8, Bacillus thermotolerans, Bacillus thermotolerans Yang et al. 2013, CCTCC AB 2012108, KACC 16706, Q. thermotolerans, strain SgZ-8
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