STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
QY95_02692Stage V sporulation protein AA (SpoVAA). (207 aa)    
Predicted Functional Partners:
QY95_02693
Stage V sporulation protein AB (SpoVAB).
 
  
 0.964
QY95_02694
Stage V sporulation protein AF (SpoVAF).
 
   
 0.772
QY95_02691
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.659
spoIIAB
Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
 
     0.646
QY95_02677
Putative membrane protein.
  
     0.628
QY95_02689
Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
     0.615
QY95_02437
Stage II sporulation serine phosphatase for sigma-F activation (SpoIIE).
  
     0.613
QY95_03060
Stage III sporulation protein AF.
  
     0.613
QY95_03061
Stage III sporulation protein AG.
  
     0.574
QY95_02438
VWFA domain-containing protein.
  
     0.562
Your Current Organism:
Quasibacillus thermotolerans
NCBI taxonomy Id: 1221996
Other names: Bacillaceae bacterium 5.5LF48TDT, Bacillaceae bacterium MTCC 8252, Bacillus sp. SgZ-8, Bacillus thermotolerans, Bacillus thermotolerans Yang et al. 2013, CCTCC AB 2012108, KACC 16706, Q. thermotolerans, strain SgZ-8
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