STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
QY95_02954Dipeptide epimerase. (360 aa)    
Predicted Functional Partners:
QY95_02953
Uncharacterized protein.
 
     0.878
QY95_02955
NLP/P60 family protein.
 
    0.852
QY95_02952
DUF3870 domain-containing protein.
 
     0.731
QY95_03410
(2-pyrone-4,6-)dicarboxylic acid hydrolase.
    
 0.487
QY95_02956
Oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.465
QY95_02278
Protein often near L-alanine-DL-glutamate epimerase.
     0.460
QY95_02248
L-lactate dehydrogenase.
    
 0.446
QY95_03209
Gluconate 2-dehydrogenase, membrane-bound, flavoprotein.
    
  0.443
QY95_03401
Proline racemase; Belongs to the proline racemase family.
     
 0.438
QY95_00164
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
   
 
  0.421
Your Current Organism:
Quasibacillus thermotolerans
NCBI taxonomy Id: 1221996
Other names: Bacillaceae bacterium 5.5LF48TDT, Bacillaceae bacterium MTCC 8252, Bacillus sp. SgZ-8, Bacillus thermotolerans, Bacillus thermotolerans Yang et al. 2013, CCTCC AB 2012108, KACC 16706, Q. thermotolerans, strain SgZ-8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.