STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
QY95_03364Tricarboxylate transport protein TctC. (324 aa)    
Predicted Functional Partners:
QY95_03363
Response regulator.
 
    0.945
QY95_00918
Tricarboxylate transport membrane protein TctA.
 
  
 0.944
QY95_03362
Sensor kinase CitA, DpiB.
 
    0.929
QY95_00920
Sensor kinase CitA, DpiB.
 
    0.699
QY95_00919
Transcriptional regulatory protein CitB, DpiA.
 
    0.688
QY95_00730
Two-component response regulator, malate.
 
    0.678
QY95_00731
Two-component sensor histidine kinase, malate.
 
    0.670
QY95_02034
TRAP transporter, 4TM/12TM fusion protein.
  
     0.638
QY95_02035
TRAP transporter solute receptor.
  
   
 0.575
QY95_03361
Citrate transporter, CitM family.
       0.510
Your Current Organism:
Quasibacillus thermotolerans
NCBI taxonomy Id: 1221996
Other names: Bacillaceae bacterium 5.5LF48TDT, Bacillaceae bacterium MTCC 8252, Bacillus sp. SgZ-8, Bacillus thermotolerans, Bacillus thermotolerans Yang et al. 2013, CCTCC AB 2012108, KACC 16706, Q. thermotolerans, strain SgZ-8
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