STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
QY95_03401Proline racemase; Belongs to the proline racemase family. (327 aa)    
Predicted Functional Partners:
QY95_02005
Ornithine cyclodeaminase.
  
 0.905
QY95_00692
Ornithine cyclodeaminase.
 
  
 0.783
QY95_02004
Sarcosine oxidase beta subunit.
 
 
 0.726
QY95_03189
Ornithine cyclodeaminase.
 
  
 0.675
QY95_04005
Ornithine cyclodeaminase.
 
  
 0.670
QY95_01819
Proline dehydrogenase (Proline oxidase).
    
 0.661
QY95_02162
Late competence protein ComER.
    
 0.605
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
 0.605
QY95_02265
D-amino acid dehydrogenase small subunit.
 
 
 0.600
QY95_00775
Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
  0.551
Your Current Organism:
Quasibacillus thermotolerans
NCBI taxonomy Id: 1221996
Other names: Bacillaceae bacterium 5.5LF48TDT, Bacillaceae bacterium MTCC 8252, Bacillus sp. SgZ-8, Bacillus thermotolerans, Bacillus thermotolerans Yang et al. 2013, CCTCC AB 2012108, KACC 16706, Q. thermotolerans, strain SgZ-8
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