STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNA91016.1Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)    
Predicted Functional Partners:
KNA92973.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.967
KNA91015.1
Protein translocase component YidC; Functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.931
KNA91273.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.899
KNA91014.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.897
KNA91274.1
Ribosomal RNA small subunit methyltransferase G; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.877
KNA92950.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.778
KNA91847.1
Diacylglyceryl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.713
KNA91517.1
50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.693
KNA89390.1
Transcription termination factor Rho; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.672
KNA91848.1
Tryptophan synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.663
Your Current Organism:
Gordonia jacobaea
NCBI taxonomy Id: 122202
Other names: G. jacobaea
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