STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNA91279.1C-5 sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
KNA91170.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.894
KNA91925.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.858
KNA90745.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.734
KNA90550.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.622
KNA92120.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.620
KNA91139.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.620
KNA90365.1
Phenol 2-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.620
KNA89482.1
2,4-dichlorophenol 6-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.620
KNA89279.1
FAD-binding monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.620
KNA91472.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.618
Your Current Organism:
Gordonia jacobaea
NCBI taxonomy Id: 122202
Other names: G. jacobaea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.