STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746845_00754Unannotated protein. (87 aa)    
Predicted Functional Partners:
GCA_000746845_00753
Unannotated protein.
       0.744
GCA_000746845_01895
Unannotated protein.
  
     0.737
GCA_000746845_00752
Unannotated protein.
       0.714
GCA_000746845_00755
Unannotated protein.
 
     0.651
GCA_000746845_01627
Unannotated protein.
  
     0.639
GCA_000746845_00234
Unannotated protein.
  
     0.626
GCA_000746845_01158
Unannotated protein.
  
     0.588
GCA_000746845_01157
Unannotated protein.
  
     0.573
GCA_000746845_00756
Unannotated protein.
       0.572
GCA_000746845_01288
Unannotated protein.
  
     0.570
Your Current Organism:
Altibacter lentus
NCBI taxonomy Id: 1223410
Other names: A. lentus, Altuibacter lentus, CGMCC 1.12167, JCM 18884, Ulvibacter sp. JLT2010, strain JLT2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.