STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746845_01788Unannotated protein. (399 aa)    
Predicted Functional Partners:
GCA_000746845_01390
Unannotated protein.
  
 
 0.932
GCA_000746845_00758
Unannotated protein.
  
  
 
0.918
GCA_000746845_00182
Unannotated protein.
  
 
 0.909
GCA_000746845_00763
Unannotated protein.
     
 0.906
GCA_000746845_01974
Unannotated protein.
 
 
  0.844
GCA_000746845_02077
Unannotated protein.
 
 
 0.825
GCA_000746845_01787
Unannotated protein.
       0.734
GCA_000746845_02076
Unannotated protein.
  
 
 0.713
GCA_000746845_02080
Unannotated protein.
 
  
 0.643
GCA_000746845_02075
Unannotated protein.
  
  
 
0.536
Your Current Organism:
Altibacter lentus
NCBI taxonomy Id: 1223410
Other names: A. lentus, Altuibacter lentus, CGMCC 1.12167, JCM 18884, Ulvibacter sp. JLT2010, strain JLT2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.