STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746845_02394Unannotated protein. (179 aa)    
Predicted Functional Partners:
GCA_000746845_02619
Unannotated protein.
   
 0.948
GCA_000746845_02618
Unannotated protein.
 
 
 0.945
GCA_000746845_02393
Unannotated protein.
 
     0.844
GCA_000746845_02395
Unannotated protein.
 
     0.838
GCA_000746845_01020
Unannotated protein.
 
 
 0.836
GCA_000746845_01818
Unannotated protein.
    
 
 0.827
GCA_000746845_01866
Unannotated protein.
 
 0.802
GCA_000746845_02396
Unannotated protein.
  
    0.782
GCA_000746845_02611
Unannotated protein.
 
 0.778
GCA_000746845_02413
Unannotated protein.
 
 0.776
Your Current Organism:
Altibacter lentus
NCBI taxonomy Id: 1223410
Other names: A. lentus, Altuibacter lentus, CGMCC 1.12167, JCM 18884, Ulvibacter sp. JLT2010, strain JLT2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.