STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613465_00972Unannotated protein. (244 aa)    
Predicted Functional Partners:
GCA_001613465_00973
Unannotated protein.
     0.988
GCA_001613465_02869
Unannotated protein.
  
 0.923
GCA_001613465_02964
Unannotated protein.
 
 0.922
GCA_001613465_06222
Unannotated protein.
  
0.922
GCA_001613465_00402
Unannotated protein.
  
 0.823
GCA_001613465_06223
Unannotated protein.
  
 0.814
GCA_001613465_02686
Unannotated protein.
  
 0.812
GCA_001613465_06221
Unannotated protein.
   
 0.806
GCA_001613465_01667
Unannotated protein.
  
 0.805
GCA_001613465_03659
Unannotated protein.
  
 0.783
Your Current Organism:
Nocardia niwae
NCBI taxonomy Id: 1223489
Other names: N. niwae NBRC 108934 = DSM 45340, Nocardia niwae CCUG 57756, Nocardia niwae DSM 45340, Nocardia niwae DSM 45340 = NBRC 108934, Nocardia niwae NBRC 108934, Nocardia niwae NBRC 108934 = DSM 45340, Nocardia niwae W9241, Nocardia sp. W9241
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.