STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613465_05131Unannotated protein. (138 aa)    
Predicted Functional Partners:
GCA_001613465_05132
Unannotated protein.
  
  
 0.920
GCA_001613465_05133
Unannotated protein.
 
   
 0.855
GCA_001613465_05130
Unannotated protein.
     
 0.783
GCA_001613465_00596
Unannotated protein.
  
     0.773
GCA_001613465_06662
Unannotated protein.
  
     0.773
GCA_001613465_03759
Unannotated protein.
  
     0.772
GCA_001613465_04614
Unannotated protein.
  
     0.772
GCA_001613465_03891
Unannotated protein.
  
     0.770
GCA_001613465_00147
Unannotated protein.
  
     0.768
GCA_001613465_01772
Unannotated protein.
  
     0.768
Your Current Organism:
Nocardia niwae
NCBI taxonomy Id: 1223489
Other names: N. niwae NBRC 108934 = DSM 45340, Nocardia niwae CCUG 57756, Nocardia niwae DSM 45340, Nocardia niwae DSM 45340 = NBRC 108934, Nocardia niwae NBRC 108934, Nocardia niwae NBRC 108934 = DSM 45340, Nocardia niwae W9241, Nocardia sp. W9241
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.