STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE34353.1ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (212 aa)    
Predicted Functional Partners:
AJE34354.1
Macrolide export ATP-binding/permease macB; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.999
AJE32223.1
ABC transporter inner membrane protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.965
AJE32758.1
COG3949 Uncharacterized membrane protein.
      
 0.777
AJE34355.1
COG4585 Signal transduction histidine kinase.
 
    0.745
AJE34356.1
Two-component system response regulator involved in heme homeostasis; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
   
   0.689
AJE32583.1
Hypothetical protein.
  
 
 0.660
AJE32999.1
Nitrate transport protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
    
 0.596
tsaD
UGMP family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
    0.555
cysS
COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.526
AJE33782.1
Hypothetical protein.
  
 
 0.483
Your Current Organism:
Corynebacterium humireducens
NCBI taxonomy Id: 1223515
Other names: C. humireducens NBRC 106098 = DSM 45392, Corynebacterium humireducens DSM 45392, Corynebacterium humireducens DSM 45392 = NBRC 106098, Corynebacterium humireducens MFC-5, Corynebacterium humireducens NBRC 106098, Corynebacterium humireducens NBRC 106098 = DSM 45392, Corynebacterium sp. MFC-5
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