STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571045_00039Unannotated protein. (862 aa)    
Predicted Functional Partners:
GCA_001571045_00076
Unannotated protein.
 
     0.580
GCA_001571045_00038
Unannotated protein.
       0.540
GCA_001571045_02024
Unannotated protein.
  
     0.538
GCA_001571045_01440
Unannotated protein.
  
     0.523
GCA_001571045_01590
Unannotated protein.
  
     0.512
GCA_001571045_01028
Unannotated protein.
  
     0.435
GCA_001571045_02746
Unannotated protein.
  
 
   0.407
Your Current Organism:
Curtobacterium ammoniigenes
NCBI taxonomy Id: 1223517
Other names: C. ammoniigenes NBRC 101786, Curtobacterium ammoniigenes NBRC 101786
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.