STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571045_02081Unannotated protein. (267 aa)    
Predicted Functional Partners:
GCA_001571045_00360
Unannotated protein.
  
  
  0.983
GCA_001571045_02080
Unannotated protein.
 
 
 0.983
GCA_001571045_00332
Unannotated protein.
    
  0.977
GCA_001571045_00507
Unannotated protein.
    
  0.959
GCA_001571045_02691
Unannotated protein.
    
  0.937
GCA_001571045_01374
Unannotated protein.
     
 0.867
GCA_001571045_02082
Unannotated protein.
 
    0.857
GCA_001571045_00359
Unannotated protein.
 
 
 0.825
GCA_001571045_01914
Unannotated protein.
  
 
  0.821
GCA_001571045_02245
Unannotated protein.
 
 
 0.799
Your Current Organism:
Curtobacterium ammoniigenes
NCBI taxonomy Id: 1223517
Other names: C. ammoniigenes NBRC 101786, Curtobacterium ammoniigenes NBRC 101786
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.