STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552855_00149Unannotated protein. (608 aa)    
Predicted Functional Partners:
GCA_001552855_03193
Unannotated protein.
 
  
 
0.956
GCA_001552855_03491
Unannotated protein.
  
 
0.949
GCA_001552855_02883
Unannotated protein.
 
 
 
  0.921
GCA_001552855_00148
Unannotated protein.
 
   
0.882
GCA_001552855_01722
Unannotated protein.
  
  0.838
GCA_001552855_00154
Unannotated protein.
   
  0.828
GCA_001552855_02549
Unannotated protein.
   
 0.822
GCA_001552855_00567
Unannotated protein.
 
 0.816
GCA_001552855_00770
Unannotated protein.
  
  0.801
GCA_001552855_03490
Unannotated protein.
 
  
 
0.773
Your Current Organism:
Skermania piniformis
NCBI taxonomy Id: 1223536
Other names: S. piniformis NBRC 15059, Skermania piniformis NBRC 15059
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.