STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552855_00190Unannotated protein. (439 aa)    
Predicted Functional Partners:
GCA_001552855_02474
Unannotated protein.
 
  
 0.962
GCA_001552855_03478
Unannotated protein.
  
   
 0.929
GCA_001552855_00189
Unannotated protein.
      0.924
GCA_001552855_01960
Unannotated protein.
  
   
 0.898
GCA_001552855_02042
Unannotated protein.
  
  
 0.850
GCA_001552855_00191
Unannotated protein.
       0.773
GCA_001552855_03602
Unannotated protein.
   
 0.744
GCA_001552855_03148
Unannotated protein.
   
 0.739
GCA_001552855_00685
Unannotated protein.
 
 
 
 0.705
GCA_001552855_00188
Unannotated protein.
       0.696
Your Current Organism:
Skermania piniformis
NCBI taxonomy Id: 1223536
Other names: S. piniformis NBRC 15059, Skermania piniformis NBRC 15059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.