STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552855_00785Unannotated protein. (91 aa)    
Predicted Functional Partners:
GCA_001552855_00058
Unannotated protein.
    
   0.987
GCA_001552855_00059
Unannotated protein.
    
 
 0.961
GCA_001552855_01070
Unannotated protein.
    
   0.927
GCA_001552855_01106
Unannotated protein.
    
 
 0.927
GCA_001552855_01295
Unannotated protein.
    
 
 0.927
GCA_001552855_01791
Unannotated protein.
    
   0.927
GCA_001552855_02620
Unannotated protein.
    
   0.916
GCA_001552855_02634
Unannotated protein.
    
   0.916
GCA_001552855_03341
Unannotated protein.
      
 0.763
GCA_001552855_00227
Unannotated protein.
    
   0.628
Your Current Organism:
Skermania piniformis
NCBI taxonomy Id: 1223536
Other names: S. piniformis NBRC 15059, Skermania piniformis NBRC 15059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.