STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552855_01285Unannotated protein. (429 aa)    
Predicted Functional Partners:
GCA_001552855_00140
Unannotated protein.
 
 0.997
GCA_001552855_00250
Unannotated protein.
  
 0.960
GCA_001552855_02976
Unannotated protein.
 
 0.955
GCA_001552855_01234
Unannotated protein.
    
 0.938
GCA_001552855_00186
Unannotated protein.
 
 0.881
GCA_001552855_03535
Unannotated protein.
 
 0.869
GCA_001552855_03594
Unannotated protein.
 
 
 0.867
GCA_001552855_01185
Unannotated protein.
  
 0.864
GCA_001552855_01936
Unannotated protein.
  
 0.839
GCA_001552855_03257
Unannotated protein.
  
 0.830
Your Current Organism:
Skermania piniformis
NCBI taxonomy Id: 1223536
Other names: S. piniformis NBRC 15059, Skermania piniformis NBRC 15059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.