STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552855_03022Unannotated protein. (283 aa)    
Predicted Functional Partners:
GCA_001552855_03901
Unannotated protein.
   
 0.937
GCA_001552855_00567
Unannotated protein.
   
 0.900
GCA_001552855_02872
Unannotated protein.
 
      0.896
GCA_001552855_03628
Unannotated protein.
  
 
 0.893
GCA_001552855_02549
Unannotated protein.
 
 
 0.863
GCA_001552855_00945
Unannotated protein.
 
      0.859
GCA_001552855_03023
Unannotated protein.
    
  0.765
GCA_001552855_02571
Unannotated protein.
      
 0.741
GCA_001552855_02853
Unannotated protein.
  
 
 0.680
GCA_001552855_02548
Unannotated protein.
 
 
 0.658
Your Current Organism:
Skermania piniformis
NCBI taxonomy Id: 1223536
Other names: S. piniformis NBRC 15059, Skermania piniformis NBRC 15059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.