STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001592365_00376Unannotated protein. (317 aa)    
Predicted Functional Partners:
GCA_001592365_03716
Unannotated protein.
  
 
 0.739
GCA_001592365_02549
Unannotated protein.
  
 
 0.734
GCA_001592365_03745
Unannotated protein.
 
  
 0.694
GCA_001592365_02550
Unannotated protein.
    
  0.651
GCA_001592365_02552
Unannotated protein.
    
  0.650
GCA_001592365_02553
Unannotated protein.
    
  0.648
GCA_001592365_00910
Unannotated protein.
    
 0.629
GCA_001592365_00106
Unannotated protein.
  
 
 0.530
GCA_001592365_00920
Unannotated protein.
  
 
 0.512
GCA_001592365_02648
Unannotated protein.
  
 
 0.483
Your Current Organism:
Gordonia hydrophobica
NCBI taxonomy Id: 1223541
Other names: G. hydrophobica NBRC 16057, Gordonia hydrophobica NBRC 16057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.