STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAC82168.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
dac-2
D-alanyl-D-alanine carboxypeptidase.
    
 0.714
GAC82166.1
Putative L-asparaginase.
       0.674
dac
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.656
GAC82167.1
Hypothetical protein.
       0.569
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.556
GAC83950.1
Putative glycosidase.
  
 
 0.468
hpt
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
  0.464
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.454
Your Current Organism:
Gordonia paraffinivorans
NCBI taxonomy Id: 1223543
Other names: G. paraffinivorans NBRC 108238, Gordonia paraffinivorans NBRC 108238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.