STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kshA3-ketosteroid-9-alpha-hydroxylase oxygenase subunit. (406 aa)    
Predicted Functional Partners:
GAC82729.1
Putative 3-ketosteroid delta(1)-dehydrogenase.
 
  
 0.986
GAC82742.1
Hypothetical protein.
 
    0.968
kshB
3-ketosteroid-9-alpha-hydroxylase reductase subunit.
 
 
 0.967
GAC82744.1
Putative hydroxylase.
 
   
 0.954
GAC82745.1
Putative extradiol dioxygenase.
 
  
 0.940
GAC82747.1
Hypothetical protein.
 
     0.919
GAC86187.1
Putative iron-sulfur protein.
  
  
 
0.914
kshB-2
3-ketosteroid-9-alpha-hydroxylase reductase subunit.
 
 
 0.900
GAC82716.1
Putative TetR family transcriptional regulator.
  
  
 0.898
GAC82749.1
Hypothetical protein.
 
     0.865
Your Current Organism:
Gordonia paraffinivorans
NCBI taxonomy Id: 1223543
Other names: G. paraffinivorans NBRC 108238, Gordonia paraffinivorans NBRC 108238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.