STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAC83095.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
GAC84484.1
Hypothetical protein.
  
 0.986
GAC85693.1
Putative non-ribosomal peptide synthetase.
  
 0.985
GAC85708.1
Putative non-ribosomal peptide synthetase.
  
 0.985
GAC86017.1
Putative non-ribosomal peptide synthetase.
  
 0.985
GAC86141.1
Putative non-ribosomal peptide synthetase.
  
 0.985
GAC86203.1
Putative non-ribosomal peptide synthetase.
  
 0.985
pks13
Polyketide synthase Pks13.
  
 0.975
GAC83096.1
Hypothetical protein; Belongs to the cytochrome P450 family.
     0.968
GAC83020.1
Putative non-ribosomal peptide synthetase.
  
 0.879
GAC85736.1
Putative non-ribosomal peptide synthetase.
  
 0.879
Your Current Organism:
Gordonia paraffinivorans
NCBI taxonomy Id: 1223543
Other names: G. paraffinivorans NBRC 108238, Gordonia paraffinivorans NBRC 108238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.