STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadE-8acyl-CoA dehydrogenase. (385 aa)    
Predicted Functional Partners:
fadB
Fatty oxidation complex alpha subunit.
 
 0.890
etfA
Electron transfer flavoprotein alpha subunit.
  0.832
GAC84224.1
Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
  0.811
etfB
Electron transfer flavoprotein beta subunit.
 
   0.805
echA-2
enoyl-CoA hydratase.
   
 0.779
GAC85453.1
Putative enoyl-CoA hydratase.
   
 0.774
GAC84110.1
enoyl-CoA hydratase/isomerase family protein.
   
 0.773
GAC85470.1
Putative enoyl-CoA hydratase.
   
 0.772
GAC82754.1
enoyl-CoA hydratase/isomerase family protein.
   
 0.771
GAC83217.1
enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.770
Your Current Organism:
Gordonia paraffinivorans
NCBI taxonomy Id: 1223543
Other names: G. paraffinivorans NBRC 108238, Gordonia paraffinivorans NBRC 108238
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