STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAC84779.1Putative sulfite oxidase. (520 aa)    
Predicted Functional Partners:
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
   
 0.891
GAC82659.1
Putative nitrate/sulfite reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.788
GAC84778.1
Hypothetical protein.
    
 0.786
sirA
Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
 0.783
cysN/cysC
Sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.781
cysH
Adenosine 5'-phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
     
 0.766
cysA
Sulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
    
  0.762
cysT
Sulfate ABC transporter permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.
    
  0.759
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.754
GAC85493.1
Putative thiosulfate sulfurtransferase.
    
 0.711
Your Current Organism:
Gordonia paraffinivorans
NCBI taxonomy Id: 1223543
Other names: G. paraffinivorans NBRC 108238, Gordonia paraffinivorans NBRC 108238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.