STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG-63-oxoacyl-[acyl-carrier-protein] reductase. (256 aa)    
Predicted Functional Partners:
fas
Fatty-acid synthase I.
  
 0.974
GAC84484.1
Hypothetical protein.
  
 0.821
fabG-7
3-oxoacyl-[acyl-carrier-protein] reductase.
 
    
0.820
GAC84711.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.800
GAC85003.1
Hypothetical protein.
  
   0.795
GAC83098.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.773
GAC85001.1
Hypothetical protein.
       0.773
GAC83067.1
Putative oxidoreductase.
  
     0.771
pks13
Polyketide synthase Pks13.
  
 0.769
GAC85510.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.769
Your Current Organism:
Gordonia paraffinivorans
NCBI taxonomy Id: 1223543
Other names: G. paraffinivorans NBRC 108238, Gordonia paraffinivorans NBRC 108238
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