STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAC85250.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
GAC85252.1
CaiB/BaiF family protein; Belongs to the CoA-transferase III family.
 
  
  0.869
fadE-14
acyl-CoA dehydrogenase.
  
 
  0.804
GAC82633.1
Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.799
GAC85248.1
Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.798
fabG-10
3-oxoacyl-[acyl-carrier-protein] reductase.
  
  0.795
fas
Fatty-acid synthase I.
    
 0.789
GAC85253.1
Putative IclR family transcriptional regulator.
    
  0.782
GAC85254.1
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.764
katA
Catalase; Belongs to the catalase family.
   
  0.748
GAC85246.1
Putative enoyl-CoA hydratase.
  
  0.725
Your Current Organism:
Gordonia paraffinivorans
NCBI taxonomy Id: 1223543
Other names: G. paraffinivorans NBRC 108238, Gordonia paraffinivorans NBRC 108238
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