STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613445_01072Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_001613445_04038
Unannotated protein.
  
 0.973
GCA_001613445_02734
Unannotated protein.
 
 0.960
GCA_001613445_04832
Unannotated protein.
 
 0.959
GCA_001613445_04074
Unannotated protein.
  
  
 0.878
GCA_001613445_02353
Unannotated protein.
    
 0.838
GCA_001613445_03819
Unannotated protein.
 
 0.794
GCA_001613445_03558
Unannotated protein.
 
 0.783
GCA_001613445_00874
Unannotated protein.
    
   0.779
GCA_001613445_03477
Unannotated protein.
    
   0.779
GCA_001613445_04809
Unannotated protein.
   
 
  0.769
Your Current Organism:
Nocardia grenadensis
NCBI taxonomy Id: 1223546
Other names: N. grenadensis NBRC 108939, Nocardia grenadensis GW5-5797, Nocardia grenadensis NBRC 108939, Nocardia sp. GW5-5797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.