STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613445_01279Unannotated protein. (544 aa)    
Predicted Functional Partners:
GCA_001613445_02739
Unannotated protein.
   
 0.856
GCA_001613445_00485
Unannotated protein.
  
  
 
0.812
GCA_001613445_04471
Unannotated protein.
  
  
 
0.774
GCA_001613445_00266
Unannotated protein.
  
  
 
0.773
GCA_001613445_01507
Unannotated protein.
  
 
 0.768
GCA_001613445_01506
Unannotated protein.
  
 
 0.767
GCA_001613445_02113
Unannotated protein.
   
 0.740
GCA_001613445_04315
Unannotated protein.
    
 0.735
GCA_001613445_05593
Unannotated protein.
    
 0.735
GCA_001613445_05691
Unannotated protein.
    
 0.735
Your Current Organism:
Nocardia grenadensis
NCBI taxonomy Id: 1223546
Other names: N. grenadensis NBRC 108939, Nocardia grenadensis GW5-5797, Nocardia grenadensis NBRC 108939, Nocardia sp. GW5-5797
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.