STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613445_01301Unannotated protein. (267 aa)    
Predicted Functional Partners:
GCA_001613445_04519
Unannotated protein.
     0.746
GCA_001613445_01299
Unannotated protein.
       0.678
GCA_001613445_04176
Unannotated protein.
  
 0.633
GCA_001613445_05170
Unannotated protein.
   
 
  0.632
GCA_001613445_01298
Unannotated protein.
 
     0.614
GCA_001613445_01300
Unannotated protein.
  
    0.613
GCA_001613445_03428
Unannotated protein.
  
     0.566
GCA_001613445_01297
Unannotated protein.
       0.556
GCA_001613445_01200
Unannotated protein.
   
 0.553
GCA_001613445_01193
Unannotated protein.
 
  0.473
Your Current Organism:
Nocardia grenadensis
NCBI taxonomy Id: 1223546
Other names: N. grenadensis NBRC 108939, Nocardia grenadensis GW5-5797, Nocardia grenadensis NBRC 108939, Nocardia sp. GW5-5797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.