STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613445_03284Unannotated protein. (154 aa)    
Predicted Functional Partners:
GCA_001613445_03283
Unannotated protein.
  
  
 0.823
GCA_001613445_02615
Unannotated protein.
  
 
  0.732
GCA_001613445_02785
Unannotated protein.
 
 
 0.727
GCA_001613445_03950
Unannotated protein.
    
  0.671
GCA_001613445_04038
Unannotated protein.
    
  0.629
GCA_001613445_04033
Unannotated protein.
 
  
  0.581
GCA_001613445_04789
Unannotated protein.
  
  
 0.551
GCA_001613445_02786
Unannotated protein.
      
 0.539
GCA_001613445_02773
Unannotated protein.
 
  
  0.493
GCA_001613445_02613
Unannotated protein.
  
 
  0.475
Your Current Organism:
Nocardia grenadensis
NCBI taxonomy Id: 1223546
Other names: N. grenadensis NBRC 108939, Nocardia grenadensis GW5-5797, Nocardia grenadensis NBRC 108939, Nocardia sp. GW5-5797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.