STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613505_00084Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_001613505_00083
Unannotated protein.
 
     0.926
GCA_001613505_00082
Unannotated protein.
  
    0.802
GCA_001613505_06148
Unannotated protein.
  
     0.698
GCA_001613505_03093
Unannotated protein.
  
     0.682
GCA_001613505_01263
Unannotated protein.
  
     0.666
GCA_001613505_01190
Unannotated protein.
  
     0.657
GCA_001613505_01672
Unannotated protein.
  
     0.652
GCA_001613505_00540
Unannotated protein.
  
     0.648
GCA_001613505_02110
Unannotated protein.
  
     0.631
GCA_001613505_01075
Unannotated protein.
  
     0.628
Your Current Organism:
Nocardia mikamii
NCBI taxonomy Id: 1223548
Other names: N. mikamii NBRC 108933, Nocardia mikamii DSM 45174, Nocardia mikamii NBRC 108933, Nocardia mikamii W8061, Nocardia sp. W8061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.