STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613505_05780Unannotated protein. (809 aa)    
Predicted Functional Partners:
GCA_001613505_02935
Unannotated protein.
 
 
 
 0.977
GCA_001613505_05098
Unannotated protein.
 
  
 0.941
GCA_001613505_05099
Unannotated protein.
 
  
 0.897
GCA_001613505_01120
Unannotated protein.
 
 0.831
GCA_001613505_01124
Unannotated protein.
 
 
0.651
GCA_001613505_02850
Unannotated protein.
  
 0.650
GCA_001613505_04273
Unannotated protein.
  
 0.650
GCA_001613505_01119
Unannotated protein.
   
 
 0.621
GCA_001613505_05695
Unannotated protein.
 
 
 0.578
GCA_001613505_02613
Unannotated protein.
   
 0.540
Your Current Organism:
Nocardia mikamii
NCBI taxonomy Id: 1223548
Other names: N. mikamii NBRC 108933, Nocardia mikamii DSM 45174, Nocardia mikamii NBRC 108933, Nocardia mikamii W8061, Nocardia sp. W8061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.