STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613505_06233Unannotated protein. (301 aa)    
Predicted Functional Partners:
GCA_001613505_06228
Unannotated protein.
 
  
 0.979
GCA_001613505_02897
Unannotated protein.
 
  
 0.923
GCA_001613505_06237
Unannotated protein.
 
  
 0.889
GCA_001613505_04350
Unannotated protein.
    
 0.884
GCA_001613505_06224
Unannotated protein.
 
   
 0.808
GCA_001613505_01295
Unannotated protein.
 
   
 0.744
GCA_001613505_06234
Unannotated protein.
    
 0.690
GCA_001613505_05238
Unannotated protein.
    
 0.658
GCA_001613505_01360
Unannotated protein.
 
   
 0.638
GCA_001613505_06232
Unannotated protein.
       0.565
Your Current Organism:
Nocardia mikamii
NCBI taxonomy Id: 1223548
Other names: N. mikamii NBRC 108933, Nocardia mikamii DSM 45174, Nocardia mikamii NBRC 108933, Nocardia mikamii W8061, Nocardia sp. W8061
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.