Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU16529.1 | SDU16557.1 | SAMN04490201_0471 | SAMN04490201_0472 | Disulfide bond formation protein DsbB. | HemY protein. | 0.663 |
SDU16529.1 | SDU16584.1 | SAMN04490201_0471 | SAMN04490201_0473 | Disulfide bond formation protein DsbB. | Uroporphyrin-3 C-methyltransferase. | 0.613 |
SDU16529.1 | SDU16609.1 | SAMN04490201_0471 | SAMN04490201_0474 | Disulfide bond formation protein DsbB. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.592 |
SDU16529.1 | SDU42633.1 | SAMN04490201_0471 | SAMN04490201_1565 | Disulfide bond formation protein DsbB. | Putative negative regulator of RcsB-dependent stress response. | 0.433 |
SDU16529.1 | hemC | SAMN04490201_0471 | SAMN04490201_0475 | Disulfide bond formation protein DsbB. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.501 |
SDU16557.1 | SDU16529.1 | SAMN04490201_0472 | SAMN04490201_0471 | HemY protein. | Disulfide bond formation protein DsbB. | 0.663 |
SDU16557.1 | SDU16584.1 | SAMN04490201_0472 | SAMN04490201_0473 | HemY protein. | Uroporphyrin-3 C-methyltransferase. | 0.990 |
SDU16557.1 | SDU16609.1 | SAMN04490201_0472 | SAMN04490201_0474 | HemY protein. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.897 |
SDU16557.1 | SDU23419.1 | SAMN04490201_0472 | SAMN04490201_0741 | HemY protein. | Hypothetical protein. | 0.682 |
SDU16557.1 | SDU36297.1 | SAMN04490201_0472 | SAMN04490201_1255 | HemY protein. | LPS-assembly lipoprotein. | 0.639 |
SDU16557.1 | SDU42633.1 | SAMN04490201_0472 | SAMN04490201_1565 | HemY protein. | Putative negative regulator of RcsB-dependent stress response. | 0.660 |
SDU16557.1 | hemC | SAMN04490201_0472 | SAMN04490201_0475 | HemY protein. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.827 |
SDU16557.1 | lolB | SAMN04490201_0472 | SAMN04490201_4808 | HemY protein. | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.721 |
SDU16557.1 | queA | SAMN04490201_0472 | SAMN04490201_1542 | HemY protein. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.676 |
SDU16557.1 | ruvB | SAMN04490201_0472 | SAMN04490201_4250 | HemY protein. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.868 |
SDU16584.1 | SDU16529.1 | SAMN04490201_0473 | SAMN04490201_0471 | Uroporphyrin-3 C-methyltransferase. | Disulfide bond formation protein DsbB. | 0.613 |
SDU16584.1 | SDU16557.1 | SAMN04490201_0473 | SAMN04490201_0472 | Uroporphyrin-3 C-methyltransferase. | HemY protein. | 0.990 |
SDU16584.1 | SDU16609.1 | SAMN04490201_0473 | SAMN04490201_0474 | Uroporphyrin-3 C-methyltransferase. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.981 |
SDU16584.1 | SDU23419.1 | SAMN04490201_0473 | SAMN04490201_0741 | Uroporphyrin-3 C-methyltransferase. | Hypothetical protein. | 0.657 |
SDU16584.1 | SDU36297.1 | SAMN04490201_0473 | SAMN04490201_1255 | Uroporphyrin-3 C-methyltransferase. | LPS-assembly lipoprotein. | 0.655 |
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