Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU39388.1 | SDU46596.1 | SAMN04490201_1390 | SAMN04490201_1812 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | ATP diphosphatase. | 0.705 |
SDU39388.1 | SDU49596.1 | SAMN04490201_1390 | SAMN04490201_2048 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | NUDIX domain-containing protein. | 0.692 |
SDU39388.1 | nadD | SAMN04490201_1390 | SAMN04490201_1239 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.892 |
SDU39388.1 | nadE | SAMN04490201_1390 | SAMN04490201_0131 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.408 |
SDU39388.1 | nudC | SAMN04490201_1390 | SAMN04490201_4102 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | NAD+ diphosphatase; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.679 |
SDU39388.1 | pncB | SAMN04490201_1390 | SAMN04490201_0130 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.878 |
SDU46596.1 | SDU39388.1 | SAMN04490201_1812 | SAMN04490201_1390 | ATP diphosphatase. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.705 |
SDU46596.1 | SDU49596.1 | SAMN04490201_1812 | SAMN04490201_2048 | ATP diphosphatase. | NUDIX domain-containing protein. | 0.695 |
SDU46596.1 | SDU60424.1 | SAMN04490201_1812 | SAMN04490201_3047 | ATP diphosphatase. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.815 |
SDU46596.1 | SDU72510.1 | SAMN04490201_1812 | SAMN04490201_4296 | ATP diphosphatase. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.767 |
SDU46596.1 | nadD | SAMN04490201_1812 | SAMN04490201_1239 | ATP diphosphatase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.681 |
SDU46596.1 | nudC | SAMN04490201_1812 | SAMN04490201_4102 | ATP diphosphatase. | NAD+ diphosphatase; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.736 |
SDU46596.1 | pncB | SAMN04490201_1812 | SAMN04490201_0130 | ATP diphosphatase. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.746 |
SDU49596.1 | SDU39388.1 | SAMN04490201_2048 | SAMN04490201_1390 | NUDIX domain-containing protein. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.692 |
SDU49596.1 | SDU46596.1 | SAMN04490201_2048 | SAMN04490201_1812 | NUDIX domain-containing protein. | ATP diphosphatase. | 0.695 |
SDU49596.1 | SDU59419.1 | SAMN04490201_2048 | SAMN04490201_2955 | NUDIX domain-containing protein. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.767 |
SDU49596.1 | SDU60424.1 | SAMN04490201_2048 | SAMN04490201_3047 | NUDIX domain-containing protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.689 |
SDU49596.1 | SDU72424.1 | SAMN04490201_2048 | SAMN04490201_4282 | NUDIX domain-containing protein. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.758 |
SDU49596.1 | SDU72510.1 | SAMN04490201_2048 | SAMN04490201_4296 | NUDIX domain-containing protein. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.755 |
SDU49596.1 | nadD | SAMN04490201_2048 | SAMN04490201_1239 | NUDIX domain-containing protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.690 |
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