STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU65341.1Flagellar P-ring protein precursor FlgI. (367 aa)    
Predicted Functional Partners:
SDU65351.1
Flagellar L-ring protein precursor FlgH.
 
 
 0.999
SDU65363.1
Flagellar basal-body rod protein FlgG.
 
 
 0.997
SDU65375.1
Flagellar basal-body rod protein FlgF.
 
 
 0.996
SDU65386.1
Flagellar hook protein FlgE.
 
 
 0.996
SDU65399.1
Flagellar basal-body rod modification protein FlgD.
 
 
 0.996
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.996
SDU65409.1
Flagellar basal-body rod protein FlgC.
 
 
 0.995
SDU65418.1
Flagellar basal-body rod protein FlgB.
 
 
 0.995
SDU65630.1
Flagellar M-ring protein FliF.
 
 
 0.989
SDU70157.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.989
Your Current Organism:
Pseudomonas psychrophila
NCBI taxonomy Id: 122355
Other names: CCUG 53877, CIP 107901, DSM 17535, JCM 10889, P. psychrophila, Pseudomonas psychrophila Yumoto et al. 2002, Pseudomonas sp. CF149, Pseudomonas sp. E-3, strain E-3
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