Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU24597.1 | SDU71533.1 | SAMN04490201_0785 | SAMN04490201_4130 | Exodeoxyribonuclease-3. | Exodeoxyribonuclease III. | 0.736 |
SDU24597.1 | SDU73445.1 | SAMN04490201_0785 | SAMN04490201_4495 | Exodeoxyribonuclease-3. | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.748 |
SDU24597.1 | rlmL | SAMN04490201_0785 | SAMN04490201_1880 | Exodeoxyribonuclease-3. | 23S rRNA m(2)G-2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.482 |
SDU24597.1 | ung | SAMN04490201_0785 | SAMN04490201_4492 | Exodeoxyribonuclease-3. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.807 |
SDU27245.1 | SDU70470.1 | SAMN04490201_0884 | SAMN04490201_4005 | Small GTP-binding protein domain-containing protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.686 |
SDU27245.1 | SDU73445.1 | SAMN04490201_0884 | SAMN04490201_4495 | Small GTP-binding protein domain-containing protein. | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.520 |
SDU27245.1 | cmk | SAMN04490201_0884 | SAMN04490201_2430 | Small GTP-binding protein domain-containing protein. | Cytidylate kinase. | 0.829 |
SDU27245.1 | rlmL | SAMN04490201_0884 | SAMN04490201_1880 | Small GTP-binding protein domain-containing protein. | 23S rRNA m(2)G-2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.447 |
SDU70470.1 | SDU27245.1 | SAMN04490201_4005 | SAMN04490201_0884 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Small GTP-binding protein domain-containing protein. | 0.686 |
SDU70470.1 | SDU73445.1 | SAMN04490201_4005 | SAMN04490201_4495 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.676 |
SDU70470.1 | cmk | SAMN04490201_4005 | SAMN04490201_2430 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Cytidylate kinase. | 0.912 |
SDU70470.1 | der | SAMN04490201_4005 | SAMN04490201_1567 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.729 |
SDU71533.1 | SDU24597.1 | SAMN04490201_4130 | SAMN04490201_0785 | Exodeoxyribonuclease III. | Exodeoxyribonuclease-3. | 0.736 |
SDU71533.1 | SDU73445.1 | SAMN04490201_4130 | SAMN04490201_4495 | Exodeoxyribonuclease III. | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.748 |
SDU71533.1 | rlmL | SAMN04490201_4130 | SAMN04490201_1880 | Exodeoxyribonuclease III. | 23S rRNA m(2)G-2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.544 |
SDU71533.1 | ung | SAMN04490201_4130 | SAMN04490201_4492 | Exodeoxyribonuclease III. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.807 |
SDU73440.1 | SDU73445.1 | SAMN04490201_4494 | SAMN04490201_4495 | Cysteine-rich CWC. | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.768 |
SDU73440.1 | SDU73450.1 | SAMN04490201_4494 | SAMN04490201_4496 | Cysteine-rich CWC. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.624 |
SDU73440.1 | ung | SAMN04490201_4494 | SAMN04490201_4492 | Cysteine-rich CWC. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.428 |
SDU73445.1 | SDU24597.1 | SAMN04490201_4495 | SAMN04490201_0785 | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease-3. | 0.748 |
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